關於 alphafold-multimer ，我們在網路上蒐集到這些相關的討論、資訊與評價

#11. AlphaFold 2 spin-offs three months after its official release

Then in July of 2021, just 3 months ago, Deepmind and AlphaFold 2 made it again into ... Protein complex prediction with AlphaFold-Multimer.

#12. DeepMind Increases The Accuracy Of AlphaFold, With A New ...

Alphabet-owned research firm DeepMind has introduced AlphaFold-Multimer, a model that can predict the structure of multi-chain protein ...

#13. alphafold2

Preparing to run Alphafold; Running the python script run_alphafold.py; GPU Memory; Web portal; Changes in AlphaFold 2.1.1 multimer; Examples; Known issues ...

#14. AI revolutions in biology: The joys and perils of AlphaFold

Last December, the artificial intelligence (AI) AlphaFold achieved what had been ... Should AlphaFold-Multimer be able to predict coiled-coil dimers, ...

#15. ‪Augustin Zidek‬ - ‪Google 學術搜尋‬

Highly accurate protein structure prediction with AlphaFold. J Jumper, R Evans, A Pritzel, T Green, ... Protein complex prediction with AlphaFold-Multimer.

#16. Command: alphafold - UCSF RBVI

AlphaFold is an artificial intelligence method for predicting protein structures that has been ... Protein complex prediction with AlphaFold-Multimer.

#17. Martin Steinegger (마틴 스타이네거) on Twitter: "ColabFold ...

ColabFold now uses the AlphaFold-multimer models paired with MMseqs2 searches for prediction of protein complexes.

#18. DeepMind | LinkedIn

From #AlphaFold and games, to climate and the importance of a scientific method, ... We recently shared AlphaFold-Multimer, a model that can predict the ...

#19. AlphaFold – MetaCentrum

multimer : This is the AlphaFold-Multimer model. To use this model, provide a multi-sequence FASTA file. In addition, the UniProt database should have been ...

#20. AlphaFold - Wikipedia

AlphaFold is an artificial intelligence (AI) program developed by Alphabets's/Google's DeepMind which performs predictions of protein structure.

#21. Artificial intelligence powers protein-folding predictions - Nature

AlphaFold -Multimer generated high-accuracy predictions of interactions for 34% of the homodimeric complexes tested, and for 23% of heterodimeric ...

#22. AlphaFold-Multimer: 蛋白质复合体结构预测 - 上海交通大学 ...

AlphaFold -Multimer：蛋白质复合体结构预测 ... 为此，DeepMind在先前的基础上修改流程，训练得到新的AlphaFold-Multimer模型（也称AlphaFold2.1）。

#23. ParaFold: Paralleling AlphaFold for Large-Scale Predictions

AlphaFold developed by DeepMind predicts protein structures from the amino acid sequence at or near ... prediction with AlphaFold-Multimer.

#24. ‪Augustin Zidek‬ - ‪Google 学术搜索‬

Highly accurate protein structure prediction with AlphaFold. J Jumper, R Evans, A Pritzel, T Green, ... Protein complex prediction with AlphaFold-Multimer.

#25. Benchmarking Peptide-Protein Docking and Interaction ...

The recent release of AlphaFold and now AlphaFold-Multimer has caused a leap in accuracy for computational modeling of proteins.

#26. BioRxiv｜利用AlphaFold-Multitimer进行蛋白质复合物预测- 云+社区 ...

虽然AlphaFold2（AF2）实现了对结构良好的蛋白质单体结构的高精度预测，但蛋白质复合物的预测仍然是一个挑战。2021年10 月4 日，DeepMind 团队推出了AlphaFold-Multimer， ...

#27. Protein complex prediction with AlphaFold-Multimer - Hacker ...

BTW, I'm not sure how well AlphaFold predicts structures that are part of multimers in the first place? But since they have to be (relatively) ...

#28. 相关文章 - X-MOL

Benchmarking Peptide-Protein Docking and Interaction Prediction with AlphaFold-Multimer · bioRxiv - Bioinformatics Pub Date : 2021-11-18 ...

#29. About the AlphaFold-Multimer #60 - githubmemory

@deepmind has not yet released the weights for AlphaFold-Multimer models, as soon as they do, we'll add support for these in colabfold :D.

#30. Utilisation d'AlphaFold-Multimer, de simulations de ... - INSTN

Accueil / Thèses / Utilisation d'AlphaFold-Multimer, de simulations de dynamique moléculaire et d'approches expérimentales pour évaluer la contribution du ...

#31. SW:AlphaFold - TAMU HPRC

AlphaFold is an AI system that predicts a protein's 3D structure from its ... for multimer system, not used by the single chain system.

#32. AlphaFold - Proteopedia, life in 3D

If you want an AlphaFold-predicted structure for a protein sequence: If a prediction is already in the AlphaFold Database, simply download it. Otherwise, follow ...

#33. Dr. X | 继AlphaFold 2 又一重磅工具！ 专注蛋白复合物结构预测 ...

继AlphaFold 2 （ ）实现了蛋白质单体结构的高准确度预测，10 月4 日DeepMind 团队推出了名为AlphaFold-Multimer 的模型，顾名思义，专长于蛋白复合物 ...

#34. Richard Evans (0000-0003-4675-8469) - ORCID

Activities · Applying and improving AlphaFold at CASP14 · Protein complex prediction with AlphaFold-Multimer · Highly accurate protein structure prediction for the ...

#35. Machine Learning on ResearchHub

In this work, we demonstrate that an AlphaFold model trained specifically for multimeric inputs of known stoichiometry, which we call AlphaFold-Multimer, ...

#36. Protein complex prediction with AlphaFold-Multimer : r/programming

Protein complex prediction with AlphaFold-Multimer · More posts you may like · Enjoy the full Reddit experience in the app.

#37. Running Alphafold-multimer with no template - Issue Explorer

Secondly, I did an ugly hack on the alphafold/data/msa_pairing.py file in order to run the multimer pipeline without templates.

#38. AlphaFold 2: Why It Works and Its Implications for ...

Could AF2 predict the structures of multiple domain and multimeric proteins? We suspect this is likely. For some multiple domain CASP14 targets, ...

#39. Software — NBD Docs 1.0.0 documentation - GitHub Pages

AlphaFold¶. Here you will find how to run AlphaFold. AlphaFold · Running AlphaFold within Singularity · AlphaFold output · Running AlphaFold Multimer.

#40. Open source code for AlphaFold. | PythonRepo

Change log: [new feature] AlphaFold-Multimer data pipeline, model and metrics have been added. Use model_preset=multimer to run with AlphaFold- ...

#41. AlphaFold-Multimer_哔哩哔哩(゜-゜)つロ干杯~-bilibili

下载Flash插件. Flash未安装或者被禁用. AlphaFold-Multimer. 15次播放· 0条弹幕· 发布于2021-12-05 21:13:27. 学习. UP相关视频.

#42. [20211116更新] タンパク質フォールディング問題を解く: より ...

2021-10-07更新 DeepMind，”AlphaFold-Multimer"をbioRxiv に投稿 [出典] "Protein complex prediction with AlphaFold-Multimer" Evans R, ...

#43. 人工智能进一步破解蛋白质复合物结构 - 河北省科技厅

该研究同时使用了华盛顿大学的RoseTTAFold和DeepMind的AlphaFold工具， ... 了一篇论文，介绍了AlphaFold人工智能的新版本，名为AlphaFold-Multimer。

#44. AlphaFold and the amyloid landscape - ScienceDirect

... leads to the formation of multimeric assemblies, known as oligomers, ... AlphaFold and the prediction of protein aggregation from native ...

#45. Protein complex prediction with AlphaFold-Multimer - Lzo Media

Article URL: https://deepmind.com/research/publications/2021/protein-complex-prediction-with-alphafold-multimer Comments URL: ...

#46. Protein structure prediction by AlphaFold2: are ... - IUCr Journals

'solved' the protein-folding problem (The AlphaFold Team, ... exists for multimeric targets), reflecting the focus of CASP on.

#47. AlphaFold / RoseTTAFold - WWU Confluence Wiki

Alphafold 2.1.1 (Multimer) ... Can be used for both, AlphaFold and RoseTTAFold, and are located at the following path: /Applic.

#48. AI Can Now Model the Molecular Machines That Govern All Life

Just last month, his team at DeepMind posted a pre-print on AlphaFold-Multimer, an algorithmic variant that predicts protein complexes at ...

#49. DeepComplex: A Web Server of Predicting Protein Complex ...

Highly Accurate Protein Structure Prediction With AlphaFold. ... Docking Prediction of Protein-Protein Complexes and Symmetric Multimers.

#50. 人工智能破解蛋白质复合物密码—论文—科学网

该研究同时使用了华盛顿大学的RoseTTAFold和DeepMind的AlphaFold工具， ... 论文，介绍了AlphaFold人工智能工具的新版本，名为AlphaFold-Multimer。

#51. github.com-deepmind-alphafold_-_2021-11-02_17-14-38

Uniclust30,; UniProt – only for AlphaFold-Multimer,; UniRef90. We provide a script scripts/download_all_data.sh that can be used to downloadand ...

#52. [deepmind/alphafold] Reduced Databases ... - Python Issues

I was wondering whether there are any plans to make AlphaFold-Multimer compatible with the reduced database feature pipeline that ...

#53. DeepMind Introduce AlphaFold-Multimer to ... - Daily Advent

The London-based AI research firm DeepMind has introduced AlphaFold-Multimer, a model that can predict the structure of multi-chain protein complexes with ...

#54. Protein complex prediction with AlphaFold-Multimer - Hacker ...

In this work, AlphaFold-Multimer significantly increases accuracy of predicted multimeric interfaces over input-adapted single-chain ...

#55. Tim Green

Research. Protein complex prediction with AlphaFold-Multimer. bioRxiv, 2021. Applying and improving AlphaFold at CASP14. PROTEINS, 2021.

#56. AlphaFold at TACC

=$SCRATCH/output. --model_preset, # control which AlphaFold model to run, options are: =monomer | =monomer_casp14 | =monomer_ptm | =multimer ...

#57. Benchmarking Peptide-Protein Docking and ... - ScienceGate

The recent release of AlphaFold and now AlphaFold-Multimer has caused a leap in accuracy for computational modeling of proteins. Additionally, AlphaFold has ...

#58. Running AlphaFold to Predict Protein Complexes from ...

#59. Molecular Modeling the Proteins from the exo-xis Region of ...

Here, I have used the AlphaFold and RoseTTAFold machine learning ... Complex Prediction with AlphaFold-Multimer. bioRxiv 2021. [CrossRef].

#60. Protein complex prediction with AlphaFold-Multimer - Brian Lovin

BTW, I'm not sure how well AlphaFold predicts structures that are part of multimers in the first place? But since they have to be (relatively) stable as a ...

#61. 用AlphaFold-Multimer進行蛋白質複合物預測- Hacker News 熱門

用AlphaFold-Multimer進行蛋白質複合物預測. Protein complex prediction with AlphaFold-Multimer. — xbmcuser 2021-10-07 13:06 · storyHacker News.

#62. AlphaFold 2.1.1 (2021/11/6) | Research Center for Computational ...

Four databases listed below were updated/installed. For the other ones, we employed ones from Aug 19, 2021 installation. alphafold model parameters (multimer ...

#63. GalaxyHeteromer: protein heterodimer structure prediction by ...

The accuracy of this method is comparable to that of AlphaFold (18) on ... prediction of protein-protein complexes and symmetric multimers.

#64. Protein complex prediction with AlphaFold-Multimer - NewsBreak

Protein complex prediction with AlphaFold-Multimer. By Richard Evans. biorxiv.org. 2021-10-04. While the vast majority of well-structured single protein ...

#65. Dr. X | 继AlphaFold 2 又一重磅工具！ 专注蛋白复合物结构预测的 ...

对4,433 个蛋白复合物进行测试，分别考察了AlphaFold-Multimer 在异源多聚体和同源多聚体接触界面的预测准确率分别达到67% 和69%，高度精确预测的例数分别占到23% 和34% 的 ...

#66. 使用AlphaFold-Multimer 预测蛋白质复合物- 黑客新闻

Protein complex prediction with AlphaFold-Multimer. 176个赞 xbmcuser 2021-10-07 03:32:45 · 讨论 ... 使用AlphaFold-Multimer 预测蛋白质复合物- 黑客新闻 ...

#67. Major Scientific Advance: DeepMind AI AlphaFold Solves 50 ...

Today, results from CASP14 show that DeepMind's latest AlphaFold system achieves unparalleled levels of accuracy in structure prediction. The ...

#68. Benchmarking Peptide-Protein Docking and Interaction Prediction ...

Benchmarking Peptide-Protein Docking and Interaction Prediction with AlphaFold-Multimer : BiologyPreprints. November 19, 2021.

#69. AlphaFold and Molecular Visualization | Falconieri Visuals LLC

AlphaFold inspired estrogen receptor illustration ... Does the protein usually form a higher order multimer? (I.e. dimer, trimer, etc.) ...

#70. 人工智能破解蛋白质复合物密码 - 中国电子企业协会

该研究同时使用了华盛顿大学的RoseTTAFold和DeepMind的AlphaFold工具，筛选 ... 了一篇预印本论文，介绍了AlphaFold人工智能工具的新版本，名为AlphaFold-Multimer。

#71. Protein structure prediction by AlphaFold2: are attention and ...

Protein structure prediction by AlphaFold2: are attention and symmetries all ... protein structures (a different category exists for multimeric targets), ...

#72. AlphaFold2 - DESY Confluence

CSSB Submission Notes. AlphaFold 2.1. Multimer Notes. AlphaFold 2.0 · Troubleshooting. Index error; Permission denied error · How to run with ...

#73. New top story on Hacker News: Protein complex prediction with ...

New top story on Hacker News: Protein complex prediction with AlphaFold-Multimer ... 3 by xbmcuser | 0 comments on Hacker News. Hacker News.

#74. /docs/ai/alphafold/ Directory Listing · Gwern.net

Annotated bibliography of files in the directory /docs/ai/alphafold/ , most recent ... /publications/2021/protein-complex-prediction-with-alphafold-multimer.

#75. DeepMind推出「蛋白質折疊」軟體AlphaFold，可說是AI在 ...

標籤: AI 2041, 李開復, 陳楸帆, 藥物研發, 疫苗研發, COVID-19, 蛋白質, 病原體, mRNA, 蛋白質序列, AlphaFold, 藥物再利用, 自然語言處理.

#76. Install utils in colab - Life essentials

Moreover, the AlphaFold-Multimer requires searching for MSA for every unique sequence in the complex, hence it is substantially slower.

#77. 追赶AlphaFold2！天壤自研深度学习蛋白质折叠预测平台TRFold

... 公司研发的AlphaFold 一代在CASP13 中初出茅庐，首次展现了深度学习的 ... 相互作用的预测，从RoseTTAFold 到DeepMind 最新的AlphaFold-multimer ...

#78. ALPHAFOLD NEWS - BATHKITCHENANDTILESOUTH.COM

AlphaFold 2 solved the CASP protein . Oct 05, 2021 · The London-based AI research firm DeepMind has introduced AlphaFold-Multimer, a model that can predict the ...

#79. DeepMind又有AI新突破，攻克50年未解「蛋白質折疊」難題 ...

DeepMind的技術是利用資料庫中約17萬種蛋白質訓練AlphaFold，使其比較各個結構與胺基酸序列，使用了約100個至200個GPU的運算能力，並花費數個禮拜的時間 ...

#80. 【科技．未來】預測蛋白質結構神準AI AlphaFold有何重大意義？

他說AlphaFold的神經網絡學會推理蛋白質結構的幾何形狀、空間，以及如何接合那些它根據DNA序列分析下認為會靠在一起的氨基酸對。它還可評估自己猜測的結構 ...

#81. DeepMind再創新里程碑，挑戰複雜蛋白質結構問題打造準確 ...

DeepMind繼AlphaGo之後，最近挑戰複雜的蛋白質結構預測，成功打造出僅透過基因序列，準確預測蛋白3D結構的預測模型AlphaFold，並於今年投稿蛋白質結構 ...

#82. DeepMind AI 預測展現驚人準確度，蛋白質摺疊難題有解？

這項難題被稱為「蛋白質摺疊」（Protein folding），過去50 年以來一直困擾著生物學家，但DeepMind 認為它們專門為此項挑戰開發的AlphaFold 將成為 ...

#83. 「AI可以解決蛋白質結構預測的難題」之專家意見 - 新興科技 ...

今年（2020年）11月30日，開發出圍棋軟體AlphaGo的人工智慧實驗室「DeepMind」，宣布他們開發的AI軟體「AlphaFold」可以藉由胺基酸序列，快速且準確 ...

#84. DeepMind solves protein folding 'grand challenge ... - CNBC

DeepMind has developed a piece of AI software called "AlphaFold" that can accurately predict the structure that proteins will fold into in a ...

#85. 兩大頂級AI 演算法開源！Alphafold2 蛋白質預測準度逼近滿分

但到了2020 年，AI 系統Alphafold 2 取得高達92.4 分的好成績，解決了蛋白質的折疊問題。近日 Alphafold 2 開源，將會掀起生醫界的波瀾。